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SAP130 Sin3A associated protein 130 [ Pseudonaja textilis ]

Gene ID: 113436725, updated on 15-Mar-2024

Summary

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Gene symbol
SAP130
Gene description
Sin3A associated protein 130
See related
Ensembl:ENSPTXG00000018131
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769324.1 (3596868..3621639)

NW_020769324.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate 6-O-sulfotransferase 1 Neighboring gene UDP-glucose glycoprotein glucosyltransferase 1 Neighboring gene uncharacterized LOC113436726 Neighboring gene uncharacterized LOC113436727 Neighboring gene AMMECR1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769324 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sin3-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP130

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769324.1 Reference EBS10Xv2-PRI

    Range
    3596868..3621639
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026701287.1 → XP_026557072.1  histone deacetylase complex subunit SAP130 isoform X6

    Conserved Domains (2) summary
    pfam16014
    Location:636 → 996
    SAP130_C; Histone deacetylase complex subunit SAP130 C-terminus
    cl25496
    Location:233 → 563
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_026701283.1 → XP_026557068.1  histone deacetylase complex subunit SAP130 isoform X3

    Conserved Domains (2) summary
    pfam16014
    Location:636 → 1040
    SAP130_C; Histone deacetylase complex subunit SAP130 C-terminus
    cl25496
    Location:233 → 563
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  3. XM_026701286.1 → XP_026557071.1  histone deacetylase complex subunit SAP130 isoform X5

    Conserved Domains (2) summary
    pfam16014
    Location:636 → 1041
    SAP130_C; Histone deacetylase complex subunit SAP130 C-terminus
    cl25496
    Location:233 → 563
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  4. XM_026701285.1 → XP_026557070.1  histone deacetylase complex subunit SAP130 isoform X4

    Conserved Domains (2) summary
    PHA02732
    Location:296 → 469
    PHA02732; hypothetical protein; Provisional
    pfam16014
    Location:636 → 1040
    SAP130_C; Histone deacetylase complex subunit SAP130 C-terminus

  5. XM_026701281.1 → XP_026557066.1  histone deacetylase complex subunit SAP130 isoform X1

    UniProtKB/TrEMBL
    A0A670ZTL5
    Related
    ENSPTXP00000026133.1, ENSPTXT00000026940.1
    Conserved Domains (2) summary
    pfam16014
    Location:636 → 1041
    SAP130_C; Histone deacetylase complex subunit SAP130 C-terminus
    cl25496
    Location:233 → 563
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  6. XM_026701282.1 → XP_026557067.1  histone deacetylase complex subunit SAP130 isoform X2

    Conserved Domains (2) summary
    PHA02732
    Location:295 → 468
    PHA02732; hypothetical protein; Provisional
    pfam16014
    Location:635 → 1040
    SAP130_C; Histone deacetylase complex subunit SAP130 C-terminus
Nucleotide Protein
Heading Accession and Version

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