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TMCC1 transmembrane and coiled-coil domain family 1 [ Ursus arctos (brown bear) ]

Gene ID: 113257202, updated on 15-Mar-2024

Summary

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Gene symbol
TMCC1
Gene description
transmembrane and coiled-coil domain family 1
See related
EnsemblRapid:ENSUARG00005000420
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622808.1 (66491011..66723912, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929761.1 (7690448..7926686)

NW_026622808.1Genomic Context describing neighboring genes Neighboring gene histone H1.8 Neighboring gene plexin D1 Neighboring gene U6 spliceosomal RNA Neighboring gene thyrotropin releasing hormone Neighboring gene rabenosyn, RAB effector

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome fission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and coiled-coil domains protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622808.1 Reference UrsArc2.0 Primary Assembly

    Range
    66491011..66723912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044385085.3 → XP_044241020.1  transmembrane and coiled-coil domains protein 1 isoform X3

    Related
    ENSUARP00005000555.1
    Conserved Domains (1) summary
    pfam10267
    Location:114 → 527
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  2. XM_026501416.4 → XP_026357201.1  transmembrane and coiled-coil domains protein 1 isoform X2

    Related
    ENSUARP00005000567.1
    Conserved Domains (2) summary
    pfam10267
    Location:231 → 635
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
    cl01294
    Location:93 → 222
    Baseplate_J; Baseplate J-like protein

  3. XM_044385084.3 → XP_044241019.1  transmembrane and coiled-coil domains protein 1 isoform X1

    Conserved Domains (2) summary
    COG1196
    Location:443 → 566
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl01294
    Location:93 → 222
    Baseplate_J; Baseplate J-like protein

  4. XM_048227227.2 → XP_048083184.1  transmembrane and coiled-coil domains protein 1 isoform X4

  5. XM_057311956.1 → XP_057167939.1  transmembrane and coiled-coil domains protein 1 isoform X1

  6. XM_057311957.1 → XP_057167940.1  transmembrane and coiled-coil domains protein 1 isoform X1

  7. XM_048227229.2 → XP_048083186.1  transmembrane and coiled-coil domains protein 1 isoform X7

  8. XM_048227230.2 → XP_048083187.1  transmembrane and coiled-coil domains protein 1 isoform X8

  9. XM_048227228.2 → XP_048083185.1  transmembrane and coiled-coil domains protein 1 isoform X6

  10. XM_026501421.4 → XP_026357206.1  transmembrane and coiled-coil domains protein 1 isoform X5

    Conserved Domains (1) summary
    pfam10267
    Location:60 → 467
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
Nucleotide Protein
Heading Accession and Version

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