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SPATA6 spermatogenesis associated 6 [ Ursus arctos (brown bear) ]

Gene ID: 113254697, updated on 15-Mar-2024

Summary

Gene symbol
SPATA6
Gene description
spermatogenesis associated 6
See related
EnsemblRapid:ENSUARG00005000934
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
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Genomic context

Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622786.1 (67295255..67447134)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929606.1 (64699089..64850974)

NW_026622786.1Genomic Context describing neighboring genes Neighboring gene BEN domain containing 5 Neighboring gene AGBL carboxypeptidase 4 Neighboring gene solute carrier family 5 member 9 Neighboring gene nucleoside diphosphate kinase B-like

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables myosin light chain binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in motile cilium assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in sperm connecting piece IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
spermatogenesis-associated protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622786.1 Reference UrsArc2.0 Primary Assembly

    Range
    67295255..67447134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026498145.4XP_026353930.1  spermatogenesis-associated protein 6 isoform X1

    Related
    ENSUARP00005001335.1
    Conserved Domains (1) summary
    pfam14909
    Location:11149
    SPATA6; Spermatogenesis-assoc protein 6
  2. XM_026498146.4XP_026353931.1  spermatogenesis-associated protein 6 isoform X2

    Conserved Domains (1) summary
    pfam14909
    Location:11149
    SPATA6; Spermatogenesis-assoc protein 6
  3. XM_026498147.4XP_026353932.1  spermatogenesis-associated protein 6 isoform X4

    Conserved Domains (1) summary
    pfam14909
    Location:11149
    SPATA6; Spermatogenesis-assoc protein 6
  4. XM_048220349.2XP_048076306.1  spermatogenesis-associated protein 6 isoform X3