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Ubtd1 ubiquitin domain containing 1 [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113187120, updated on 15-Mar-2024

Summary

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Gene symbol
Ubtd1
Gene description
ubiquitin domain containing 1
See related
Ensembl:ENSUPAG00010014630
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020540033.1 (2057198..2111405)

NW_020540033.1Genomic Context describing neighboring genes Neighboring gene U6atac minor spliceosomal RNA Neighboring gene exosome component 1 Neighboring gene zinc finger DHHC-type palmitoyltransferase 16 Neighboring gene MMS19 homolog, cytosolic iron-sulfur assembly component Neighboring gene ankyrin repeat domain 2 Neighboring gene chromosome unknown C10orf62 homolog Neighboring gene 4-hydroxy-2-oxoglutarate aldolase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020540033 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020540033.1 Reference ASM342692v1

    Range
    2057198..2111405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026394783.1 → XP_026250568.1  ubiquitin domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8D2HUT3
    Related
    ENSUPAP00010018431.1, ENSUPAT00010020990.1
    Conserved Domains (2) summary
    cd17120
    Location:151 → 219
    Ubl_UBTD1; ubiquitin-like (Ubl) domain found in ubiquitin domain-containing protein 1 (UBTD1)
    pfam16455
    Location:25 → 127
    UBD; Ubiquitin-binding domain
Nucleotide Protein
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