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Intu inturned planar cell polarity protein [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113184274, updated on 15-Mar-2024

Summary

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Gene symbol
Intu
Gene description
inturned planar cell polarity protein
See related
Ensembl:ENSUPAG00010021438
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020539970.1 (3727336..3815506, complement)

NW_020539970.1Genomic Context describing neighboring genes Neighboring gene AP-4 complex subunit sigma-1 pseudogene Neighboring gene solute carrier family 25 member 31 Neighboring gene heat shock protein family A (Hsp70) member 4 like Neighboring gene zinc finger CCHC domain-containing protein 9 pseudogene Neighboring gene FAT atypical cadherin 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020539970 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of planar polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein inturned

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020539970.1 Reference ASM342692v1

    Range
    3727336..3815506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026390918.1 → XP_026246703.1  protein inturned

    UniProtKB/TrEMBL
    A0A8D2I7M1
    Related
    ENSUPAP00010027166.1, ENSUPAT00010030918.1
    Conserved Domains (1) summary
    cd00136
    Location:201 → 262
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
Nucleotide Protein
Heading Accession and Version

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