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Galnt15 polypeptide N-acetylgalactosaminyltransferase 15 [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113182629, updated on 15-Mar-2024

Summary

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Gene symbol
Galnt15
Gene description
polypeptide N-acetylgalactosaminyltransferase 15
See related
Ensembl:ENSUPAG00010014931
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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See Galnt15 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020539948.1 (6178197..6220194)

NW_020539948.1Genomic Context describing neighboring genes Neighboring gene palmitoyltransferase ZDHHC6 pseudogene Neighboring gene ankyrin repeat domain 28 Neighboring gene uncharacterized LOC113182589 Neighboring gene oxidoreductase NAD binding domain containing 1 Neighboring gene diphthamide biosynthesis 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020539948 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020539948.1 Reference ASM342692v1

    Range
    6178197..6220194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026388582.1 → XP_026244367.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X1

    UniProtKB/TrEMBL
    A0A8D2HPN2, A0A8D2HPP0
    Related
    ENSUPAP00010018849.1, ENSUPAT00010021460.1
    Conserved Domains (2) summary
    cd02510
    Location:196 → 496
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:508 → 631
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_026388584.1 → XP_026244369.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X2

    Conserved Domains (1) summary
    cd02510
    Location:196 → 496
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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