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Hopx HOP homeobox [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113181049, updated on 15-Mar-2024

Summary

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Gene symbol
Hopx
Gene description
HOP homeobox
See related
Ensembl:ENSUPAG00010000088
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020539890.1 (20708925..20739812, complement)

NW_020539890.1Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor like GTPase 9 Neighboring gene sperm microtubule associated protein 2 like Neighboring gene small nucleolar RNA U13 Neighboring gene serine peptidase inhibitor Kazal type 2 Neighboring gene RE1 silencing transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020539890 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeodomain-only protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020539890.1 Reference ASM342692v1

    Range
    20708925..20739812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026386425.1 → XP_026242210.1  homeodomain-only protein

    UniProtKB/TrEMBL
    A0A8D2GNY8
    Conserved Domains (1) summary
    cd00086
    Location:10 → 62
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  2. XM_026386435.1 → XP_026242220.1  homeodomain-only protein

    UniProtKB/TrEMBL
    A0A8D2GNY8
    Conserved Domains (1) summary
    cd00086
    Location:10 → 62
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  3. XM_026386440.1 → XP_026242225.1  homeodomain-only protein

    UniProtKB/TrEMBL
    A0A8D2GNY8
    Related
    ENSUPAP00010000058.1, ENSUPAT00010000064.1
    Conserved Domains (1) summary
    cd00086
    Location:10 → 62
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  4. XM_026386416.1 → XP_026242201.1  homeodomain-only protein

    UniProtKB/TrEMBL
    A0A8D2GNY8
    Conserved Domains (1) summary
    cd00086
    Location:10 → 62
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  5. XM_026386407.1 → XP_026242192.1  homeodomain-only protein

    UniProtKB/TrEMBL
    A0A8D2GNY8
    Conserved Domains (1) summary
    cd00086
    Location:10 → 62
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Nucleotide Protein
Heading Accession and Version

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