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Alas1 5'-aminolevulinate synthase 1 [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113179400, updated on 15-Mar-2024

Summary

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Gene symbol
Alas1
Gene description
5'-aminolevulinate synthase 1
See related
Ensembl:ENSUPAG00010022417
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020539914.1 (5912109..5926085, complement)

NW_020539914.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1M Neighboring gene twinfilin-2 Neighboring gene translationally-controlled tumor protein-like Neighboring gene uncharacterized LOC113179381 Neighboring gene POC1 centriolar protein A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020539914 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5-aminolevulinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in erythrocyte development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heme biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hemoglobin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-aminolevulinate synthase, nonspecific, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020539914.1 Reference ASM342692v1

    Range
    5912109..5926085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026383986.1 → XP_026239771.1  5-aminolevulinate synthase, nonspecific, mitochondrial

    UniProtKB/TrEMBL
    A0A8D2IHX4, A0A8D2IIM7
    Related
    ENSUPAP00010028385.1, ENSUPAT00010032316.1
    Conserved Domains (2) summary
    pfam09029
    Location:2 → 138
    Preseq_ALAS; 5-aminolevulinate synthase presequence
    cl18945
    Location:197 → 602
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
Heading Accession and Version

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