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adamtsl4 ADAMTS-like 4 [ Anabas testudineus (climbing perch) ]

Gene ID: 113169727, updated on 15-Mar-2024

Summary

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Gene symbol
adamtsl4
Gene description
ADAMTS-like 4
See related
Ensembl:ENSATEG00000023565
Gene type
protein coding
RefSeq status
MODEL
Organism
Anabas testudineus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Anabantidae; Anabas
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
18
Annotation release Status Assembly Chr Location
101 current fAnaTes1.2 (GCF_900324465.2) 16 NC_046625.1 (10476089..10505189, complement)
100 previous assembly fAnaTes1.1 (GCF_900324465.1) Unplaced Scaffold NW_020536004.1 (30351089..30380189, complement)

Chromosome 16 - NC_046625.1Genomic Context describing neighboring genes Neighboring gene ceramide synthase 2b Neighboring gene CUGBP Elav-like family member 3 Neighboring gene threonyl-tRNA synthetase 2, mitochondrial Neighboring gene regulation of nuclear pre-mRNA domain containing 2b Neighboring gene PRP3 pre-mRNA processing factor 3 homolog (yeast)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thrombospondin type-1 domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anabas testudineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAnaTes1.2 Primary Assembly

Genomic

  1. NC_046625.1 Reference fAnaTes1.2 Primary Assembly

    Range
    10476089..10505189 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026371372.1 → XP_026227157.1  thrombospondin type-1 domain-containing protein 4

    UniProtKB/TrEMBL
    A0A3Q1JMB0
    Related
    ENSATEP00000034295.1, ENSATET00000034793.2

RNA

  1. XR_003299581.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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