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ablim1a actin binding LIM protein 1a [ Anabas testudineus (climbing perch) ]

Gene ID: 113158964, updated on 15-Mar-2024

Summary

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Gene symbol
ablim1a
Gene description
actin binding LIM protein 1a
See related
Ensembl:ENSATEG00000013971
Gene type
protein coding
RefSeq status
MODEL
Organism
Anabas testudineus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Anabantidae; Anabas
Also known as
ablim1
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 15
Exon count:
28
Annotation release Status Assembly Chr Location
101 current fAnaTes1.2 (GCF_900324465.2) 15 NC_046624.1 (5795732..5828743, complement)
100 previous assembly fAnaTes1.1 (GCF_900324465.1) Unplaced Scaffold NW_020535991.1 (5795732..5828743, complement)

Chromosome 15 - NC_046624.1Genomic Context describing neighboring genes Neighboring gene probable E3 ubiquitin-protein ligase TRIML1 Neighboring gene hyaluronan binding protein 2 Neighboring gene FHF complex subunit HOOK interacting protein 2 Neighboring gene serum response factor b Neighboring gene protein tyrosine kinase 7b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lamellipodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin-binding LIM protein 1a
Names
actin binding LIM protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anabas testudineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAnaTes1.2 Primary Assembly

Genomic

  1. NC_046624.1 Reference fAnaTes1.2 Primary Assembly

    Range
    5795732..5828743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026355384.1 → XP_026211169.1  actin-binding LIM protein 1a isoform X3

    UniProtKB/TrEMBL
    A0A3Q1JX65

  2. XM_026355392.1 → XP_026211177.1  actin-binding LIM protein 1a isoform X11

    UniProtKB/TrEMBL
    A0A3Q1IR00

  3. XM_026355391.1 → XP_026211176.1  actin-binding LIM protein 1a isoform X10

    UniProtKB/TrEMBL
    A0A3Q1IR00
    Related
    ENSATEP00000020108.1, ENSATET00000020454.2

  4. XM_026355389.1 → XP_026211174.1  actin-binding LIM protein 1a isoform X8

    UniProtKB/TrEMBL
    A0A3Q1JX65
    Related
    ENSATEP00000020146.2, ENSATET00000020492.2

  5. XM_026355390.1 → XP_026211175.1  actin-binding LIM protein 1a isoform X9

    UniProtKB/TrEMBL
    A0A3Q1IR00

  6. XM_026355387.1 → XP_026211172.1  actin-binding LIM protein 1a isoform X6

    UniProtKB/TrEMBL
    A0A3Q1JX65

  7. XM_026355388.1 → XP_026211173.1  actin-binding LIM protein 1a isoform X7

    UniProtKB/TrEMBL
    A0A3Q1IR00

  8. XM_026355382.1 → XP_026211167.1  actin-binding LIM protein 1a isoform X1

    UniProtKB/TrEMBL
    A0A3Q1JX65

  9. XM_026355385.1 → XP_026211170.1  actin-binding LIM protein 1a isoform X4

    UniProtKB/TrEMBL
    A0A3Q1JX65

  10. XM_026355396.1 → XP_026211181.1  actin-binding LIM protein 1a isoform X14

    UniProtKB/TrEMBL
    A0A3Q1IR00

  11. XM_026355395.1 → XP_026211180.1  actin-binding LIM protein 1a isoform X13

    UniProtKB/TrEMBL
    A0A3Q1IR00

  12. XM_026355393.1 → XP_026211178.1  actin-binding LIM protein 1a isoform X12

    UniProtKB/TrEMBL
    A0A3Q1JX65

  13. XM_026355383.1 → XP_026211168.1  actin-binding LIM protein 1a isoform X2

    UniProtKB/TrEMBL
    A0A3Q1JX65

  14. XM_026355386.1 → XP_026211171.1  actin-binding LIM protein 1a isoform X5

    UniProtKB/TrEMBL
    A0A3Q1JX65
Nucleotide Protein
Heading Accession and Version

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