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rbx1 ring-box 1, E3 ubiquitin protein ligase [ Anabas testudineus (climbing perch) ]

Gene ID: 113152874, updated on 15-Mar-2024

Summary

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Gene symbol
rbx1
Gene description
ring-box 1, E3 ubiquitin protein ligase
See related
Ensembl:ENSATEG00000007548
Gene type
protein coding
RefSeq status
MODEL
Organism
Anabas testudineus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Anabantidae; Anabas
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
101 current fAnaTes1.2 (GCF_900324465.2) 8 NC_046617.1 (18966983..18969469, complement)
100 previous assembly fAnaTes1.1 (GCF_900324465.1) Unplaced Scaffold NW_020535982.1 (18966983..18969469, complement)

Chromosome 8 - NC_046617.1Genomic Context describing neighboring genes Neighboring gene E1A binding protein p300 b Neighboring gene X-prolyl aminopeptidase 3, mitochondrial Neighboring gene ST13 Hsp70 interacting protein Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene chondroadherin-like a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cullin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cullin-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RBX1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anabas testudineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAnaTes1.2 Primary Assembly

Genomic

  1. NC_046617.1 Reference fAnaTes1.2 Primary Assembly

    Range
    18966983..18969469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026346377.1 → XP_026202162.1  E3 ubiquitin-protein ligase RBX1

    UniProtKB/TrEMBL
    A0A3Q1HPF9
    Related
    ENSATEP00000010727.1, ENSATET00000010911.2
    Conserved Domains (1) summary
    cd16485
    Location:40 → 101
    mRING-H2-C3H2C2D_RBX1; modified RING finger, H2 subclass (C3H2C2D-type), found in RING-box protein 1 (RBX1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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