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znhit1 zinc finger, HIT-type containing 1 [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113140811, updated on 15-Mar-2024

Summary

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Gene symbol
znhit1
Gene description
zinc finger, HIT-type containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
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Genomic context

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See znhit1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
10
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 18 NC_046650.1 (18851023..18854932, complement)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535858.1 (18851023..18854932, complement)

Chromosome 18 - NC_046650.1Genomic Context describing neighboring genes Neighboring gene CD276 antigen homolog Neighboring gene serrate RNA effector molecule homolog Neighboring gene procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 Neighboring gene cytochrome b5 domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger HIT domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046650.1 Reference fMasArm1.2 Primary Assembly

    Range
    18851023..18854932 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026324836.1 → XP_026180621.1  zinc finger HIT domain-containing protein 1 isoform X2

  2. XM_026324832.1 → XP_026180617.1  zinc finger HIT domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A7N9ALU3
    Conserved Domains (2) summary
    pfam04438
    Location:115 → 142
    zf-HIT; HIT zinc finger
    cl02154
    Location:74 → 137
    YL1_C; YL1 nuclear protein C-terminal domain

RNA

  1. XR_003296689.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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