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fancd2 FA complementation group D2 [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113131037, updated on 15-Mar-2024

Summary

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Gene symbol
fancd2
Gene description
FA complementation group D2
See related
Ensembl:ENSMAMG00000023944
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
42
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 5 NC_046637.1 (27748513..27759895)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535886.1 (14991183..15002565, complement)

Chromosome 5 - NC_046637.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 4 (proto-oncogene) Neighboring gene glutathione peroxidase 1b Neighboring gene testis expressed 264, ER-phagy receptor a Neighboring gene glutamate receptor, metabotropic 2a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA polymerase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair involved in meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homologous chromosome pairing at meiosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic intra-S DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in condensed chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group D2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046637.1 Reference fMasArm1.2 Primary Assembly

    Range
    27748513..27759895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026308076.1 → XP_026163861.1  Fanconi anemia group D2 protein

    UniProtKB/TrEMBL
    A0A3Q3N700
    Related
    ENSMAMP00000066831.1, ENSMAMT00000043936.1
    Conserved Domains (1) summary
    cl17018
    Location:33 → 1399
    FANC; Fanconi anemia ID complex proteins FANCI and FANCD2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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