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ralgapa1 Ral GTPase activating protein catalytic subunit alpha 1 [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113130571, updated on 15-Mar-2024

Summary

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Gene symbol
ralgapa1
Gene description
Ral GTPase activating protein catalytic subunit alpha 1
See related
Ensembl:ENSMAMG00000013097
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 22
Exon count:
48
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 22 NC_046654.1 (16325703..16384895)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535848.1 (16325703..16384895)

Chromosome 22 - NC_046654.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113129290 Neighboring gene MIA SH3 domain ER export factor 2 Neighboring gene BRMS1 like transcriptional repressor a Neighboring gene INSM transcriptional repressor 2 Neighboring gene proteasome 20S subunit alpha 6a Neighboring gene nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ral GTPase-activating protein subunit alpha-1
Names
Ral GTPase activating protein catalytic alpha subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046654.1 Reference fMasArm1.2 Primary Assembly

    Range
    16325703..16384895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026307352.1 → XP_026163137.1  ral GTPase-activating protein subunit alpha-1 isoform X5

    UniProtKB/TrEMBL
    A0A7N8X4N6
    Conserved Domains (1) summary
    pfam02145
    Location:2527 → 2700
    Rap_GAP; Rap/ran-GAP

  2. XM_026307361.1 → XP_026163146.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A7N9AZU1
    Conserved Domains (1) summary
    pfam02145
    Location:1986 → 2159
    Rap_GAP; Rap/ran-GAP

  3. XM_026307319.1 → XP_026163104.1  ral GTPase-activating protein subunit alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A7N8X4N6
    Conserved Domains (1) summary
    pfam02145
    Location:2478 → 2651
    Rap_GAP; Rap/ran-GAP

  4. XM_026307344.1 → XP_026163129.1  ral GTPase-activating protein subunit alpha-1 isoform X4

    UniProtKB/TrEMBL
    A0A7N9AZU1
    Related
    ENSMAMP00000041876.1, ENSMAMT00000062791.1
    Conserved Domains (1) summary
    pfam02145
    Location:1937 → 2110
    Rap_GAP; Rap/ran-GAP

  5. XM_026307327.1 → XP_026163112.1  ral GTPase-activating protein subunit alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A7N8X4N6
    Conserved Domains (1) summary
    pfam02145
    Location:2475 → 2648
    Rap_GAP; Rap/ran-GAP

  6. XM_026307335.1 → XP_026163120.1  ral GTPase-activating protein subunit alpha-1 isoform X3

    UniProtKB/TrEMBL
    A0A7N8X4N6
    Related
    ENSMAMP00000066361.1, ENSMAMT00000042282.1
    Conserved Domains (1) summary
    pfam02145
    Location:2478 → 2651
    Rap_GAP; Rap/ran-GAP

  7. XM_026307371.1 → XP_026163156.1  ral GTPase-activating protein subunit alpha-1 isoform X7

    UniProtKB/TrEMBL
    A0A7N9AZU1
    Related
    ENSMAMP00000060379.1, ENSMAMT00000044922.1
    Conserved Domains (1) summary
    pfam02145
    Location:1986 → 2159
    Rap_GAP; Rap/ran-GAP
Nucleotide Protein
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