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vps45 vacuolar protein sorting 45 homolog [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113126146, updated on 15-Mar-2024

Summary

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Gene symbol
vps45
Gene description
vacuolar protein sorting 45 homolog
See related
Ensembl:ENSMAMG00000022168
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 11 NC_046643.1 (22644933..22651528)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535859.1 (22644933..22651528)

Chromosome 11 - NC_046643.1Genomic Context describing neighboring genes Neighboring gene oocyte zinc finger protein XlCOF6.1-like Neighboring gene zinc finger protein 37 homolog Neighboring gene uncharacterized LOC113126165 Neighboring gene toll-like receptor 13 Neighboring gene RNA (guanine-7-) methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046643.1 Reference fMasArm1.2 Primary Assembly

    Range
    22644933..22651528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026300010.1 → XP_026155795.1  vacuolar protein sorting-associated protein 45 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3N957
    Conserved Domains (1) summary
    pfam00995
    Location:1 → 477
    Sec1; Sec1 family

  2. XM_026300009.1 → XP_026155794.1  vacuolar protein sorting-associated protein 45 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3NJ07, A0A7N8Y9T7
    Related
    ENSMAMP00000032939.1, ENSMAMT00000033794.2
    Conserved Domains (1) summary
    pfam00995
    Location:23 → 539
    Sec1; Sec1 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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