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igf2bp2a insulin-like growth factor 2 mRNA binding protein 2a [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113124047, updated on 15-Mar-2024

Summary

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Gene symbol
igf2bp2a
Gene description
insulin-like growth factor 2 mRNA binding protein 2a
See related
Ensembl:ENSMAMG00000000969
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Also known as
igf2bp2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
16
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 21 NC_046653.1 (12721424..12768195, complement)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535966.1 (12721424..12768195, complement)

Chromosome 21 - NC_046653.1Genomic Context describing neighboring genes Neighboring gene enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase Neighboring gene transmembrane protein 41aa Neighboring gene uncharacterized LOC113124049 Neighboring gene meprin A subunit alpha-like Neighboring gene transformer 2 beta homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
insulin-like growth factor 2 mRNA-binding protein 2
Names
insulin like growth factor 2 mRNA binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046653.1 Reference fMasArm1.2 Primary Assembly

    Range
    12721424..12768195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026296510.1 → XP_026152295.1  insulin-like growth factor 2 mRNA-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A7N9AUD0
    Related
    ENSMAMP00000001423.1, ENSMAMT00000001454.2
    Conserved Domains (5) summary
    cd00105
    Location:282 → 347
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd02396
    Location:440 → 501
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...
    cd12629
    Location:81 → 156
    RRM2_IGF2BP2; RNA recognition motif 2 in vertebrate insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2)
    pfam00013
    Location:519 → 585
    KH_1; KH domain
    cl17169
    Location:1 → 77
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_026296509.1 → XP_026152294.1  insulin-like growth factor 2 mRNA-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3KIZ3, A0A7N9AUD0
    Related
    ENSMAMP00000001402.1, ENSMAMT00000001431.2
    Conserved Domains (5) summary
    cd00105
    Location:282 → 347
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd02396
    Location:442 → 503
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...
    cd12629
    Location:81 → 156
    RRM2_IGF2BP2; RNA recognition motif 2 in vertebrate insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2)
    pfam00013
    Location:521 → 587
    KH_1; KH domain
    cl17169
    Location:1 → 77
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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