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pdk1 pyruvate dehydrogenase kinase, isozyme 1 [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113123042, updated on 15-Mar-2024

Summary

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Gene symbol
pdk1
Gene description
pyruvate dehydrogenase kinase, isozyme 1
See related
Ensembl:ENSMAMG00000005692
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
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Genomic context

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See pdk1 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
11
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 21 NC_046653.1 (14394081..14400461)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535966.1 (14394081..14401339)

Chromosome 21 - NC_046653.1Genomic Context describing neighboring genes Neighboring gene integrin, alpha 6a Neighboring gene nucleoporin 62 like Neighboring gene protein phosphatase 1 regulatory subunit 9A-like A Neighboring gene Rap guanine nucleotide exchange factor 4a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyruvate dehydrogenase (acetyl-transferring) kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial
Names
pyruvate dehydrogenase kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046653.1 Reference fMasArm1.2 Primary Assembly

    Range
    14394081..14400461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026294793.2 → XP_026150578.1  pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3Q3RS09, A0A7N8WZI3
    Related
    ENSMAMP00000060491.1, ENSMAMT00000046696.1
    Conserved Domains (2) summary
    smart00387
    Location:241 → 361
    HATPase_c; Histidine kinase-like ATPases
    pfam10436
    Location:27 → 191
    BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase

  2. XM_026294794.2 → XP_026150579.1  pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A7N8X4K2
    Conserved Domains (2) summary
    smart00387
    Location:180 → 300
    HATPase_c; Histidine kinase-like ATPases
    pfam10436
    Location:1 → 130
    BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
Nucleotide Protein
Heading Accession and Version

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