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tollip toll interacting protein [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113122109, updated on 15-Mar-2024

Summary

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Gene symbol
tollip
Gene description
toll interacting protein
See related
Ensembl:ENSMAMG00000010476
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 3 NC_046635.1 (26698874..26705192)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535965.1 (11296095..11302106)

Chromosome 3 - NC_046635.1Genomic Context describing neighboring genes Neighboring gene mitochondrial methionyl-tRNA formyltransferase Neighboring gene cugbp, Elav-like family member 1 Neighboring gene intestinal mucin-like protein Neighboring gene mucin-5AC-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046635.1 Reference fMasArm1.2 Primary Assembly

    Range
    26698874..26705192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026293091.2 → XP_026148876.1  toll-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q3LMP1, A0A7N8X761
    Related
    ENSMAMP00000015433.1, ENSMAMT00000015861.2
    Conserved Domains (2) summary
    cd04016
    Location:52 → 172
    C2_Tollip; C2 domain present in Toll-interacting protein (Tollip)
    cd14363
    Location:231 → 271
    CUE_TOLIP; CUE domain found in the C-terminal of toll-interacting protein (Tollip) and similar proteins

  2. XM_026293092.2 → XP_026148877.1  toll-interacting protein isoform X2

    UniProtKB/TrEMBL
    A0A3Q3M2J1
    Related
    ENSMAMP00000056429.1, ENSMAMT00000056280.1
    Conserved Domains (2) summary
    cd04016
    Location:4 → 124
    C2_Tollip; C2 domain present in Toll-interacting protein (Tollip)
    cd14363
    Location:183 → 223
    CUE_TOLIP; CUE domain found in the C-terminal of toll-interacting protein (Tollip) and similar proteins
Nucleotide Protein
Heading Accession and Version

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