U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

yif1b Yip1 interacting factor homolog B (S. cerevisiae) [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113036911, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
yif1b
Gene description
Yip1 interacting factor homolog B (S. cerevisiae)
See related
Ensembl:ENSACLG00000022321
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 14 NC_039315.1 (20705980..20710790)

Chromosome 14 - NC_039315.1Genomic Context describing neighboring genes Neighboring gene HHIP-like protein 1 Neighboring gene uncharacterized protein C14orf132-like Neighboring gene probable E3 ubiquitin-protein ligase HERC6 Neighboring gene NACHT and WD repeat domain-containing protein 2-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_039315.1 Chromosome 14 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein YIF1B
Names
Yip1 interacting factor homolog B, membrane trafficking protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039315.1 Reference fAstCal1.2 Primary Assembly

    Range
    20705980..20710790
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026193502.1 → XP_026049287.1  protein YIF1B isoform X1

    UniProtKB/TrEMBL
    A0A3P8QVK8
    Related
    ENSACLP00000032922.1, ENSACLT00000033702.1
    Conserved Domains (1) summary
    pfam03878
    Location:68 → 303
    YIF1

  2. XM_026193503.1 → XP_026049288.1  protein YIF1B isoform X2

    Conserved Domains (1) summary
    pfam03878
    Location:65 → 300
    YIF1

  3. XM_026193504.1 → XP_026049289.1  protein YIF1B isoform X3

    Conserved Domains (1) summary
    pfam03878
    Location:60 → 295
    YIF1

  4. XM_026193505.1 → XP_026049290.1  protein YIF1B isoform X4

    Conserved Domains (1) summary
    pfam03878
    Location:50 → 284
    YIF1; YIF1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.