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kpna4 karyopherin alpha 4 (importin alpha 3) [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113036092, updated on 15-Mar-2024

Summary

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Gene symbol
kpna4
Gene description
karyopherin alpha 4 (importin alpha 3)
See related
Ensembl:ENSACLG00000015275
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
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Genomic context

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See kpna4 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
17
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 14 NC_039315.1 (15388752..15404904, complement)

Chromosome 14 - NC_039315.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 80 homolog (Chlamydomonas) Neighboring gene structural maintenance of chromosomes 4 Neighboring gene tripartite motif containing 59 Neighboring gene ADP ribosylation factor like GTPase 14 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent, 1Lb

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039315.1 Chromosome 14 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear import signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NLS-bearing protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
importin subunit alpha-3
Names
karyopherin subunit alpha 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039315.1 Reference fAstCal1.2 Primary Assembly

    Range
    15388752..15404904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026192163.1 → XP_026047948.1  importin subunit alpha-3

    UniProtKB/TrEMBL
    A0A3P8Q033, A0A3P8Q090
    Related
    ENSACLP00000022628.1, ENSACLT00000023164.1
    Conserved Domains (2) summary
    COG5064
    Location:11 → 519
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    sd00043
    Location:109 → 142
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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