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csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113035221, updated on 15-Mar-2024

Summary

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Gene symbol
csgalnact2
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 2
See related
Ensembl:ENSACLG00000020337
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
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Genomic context

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See csgalnact2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 13 NC_039314.1 (6724550..6730980)

Chromosome 13 - NC_039314.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113035100 Neighboring gene ret proto-oncogene receptor tyrosine kinase Neighboring gene SEC23 interacting protein Neighboring gene minichromosome maintenance complex binding protein Neighboring gene inositol polyphosphate-5-phosphatase F

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039314.1 Chromosome 13 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039314.1 Reference fAstCal1.2 Primary Assembly

    Range
    6724550..6730980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026190623.1 → XP_026046408.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A3P8QKA9
    Conserved Domains (1) summary
    cl11394
    Location:63 → 509
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_026190622.1 → XP_026046407.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A3P8QKA9
    Related
    ENSACLP00000030045.1, ENSACLT00000030752.1
    Conserved Domains (1) summary
    cl11394
    Location:63 → 509
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_026190624.1 → XP_026046409.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A3P8QKA9
    Related
    ENSACLP00000030033.1, ENSACLT00000030739.1
    Conserved Domains (1) summary
    cl11394
    Location:63 → 509
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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