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ldlrad4b low density lipoprotein receptor class A domain containing 4b [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113032768, updated on 15-Mar-2024

Summary

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Gene symbol
ldlrad4b
Gene description
low density lipoprotein receptor class A domain containing 4b
See related
Ensembl:ENSACLG00000008722
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Also known as
ldlrad4
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 11 NC_039312.1 (5019343..5277869, complement)

Chromosome 11 - NC_039312.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113032703 Neighboring gene uncharacterized LOC113032234 Neighboring gene centrosomal protein 192 Neighboring gene SEH1-like (S. cerevisiae)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039312.1 Chromosome 11 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables R-SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
low-density lipoprotein receptor class A domain-containing protein 4
Names
low density lipoprotein receptor class A domain containing 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039312.1 Reference fAstCal1.2 Primary Assembly

    Range
    5019343..5277869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026185856.1 → XP_026041641.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A3P8P6X5
    Related
    ENSACLP00000012777.1, ENSACLT00000013094.1
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  2. XM_026185858.1 → XP_026041643.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A3P8P6X5, A0A3P8P6X9
    Related
    ENSACLP00000012782.1, ENSACLT00000013100.1

  3. XM_026185859.1 → XP_026041644.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A3P8P6X5
Nucleotide Protein
Heading Accession and Version

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