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klhl21 kelch-like family member 21 [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113013312, updated on 15-Mar-2024

Summary

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Gene symbol
klhl21
Gene description
kelch-like family member 21
See related
Ensembl:ENSACLG00000018306
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
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Genomic context

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See klhl21 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
7
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 20 NC_039321.1 (6613067..6629900, complement)

Chromosome 20 - NC_039321.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing, family G (with RhoGef domain) member 5b Neighboring gene uncharacterized LOC113013364 Neighboring gene zinc finger and BTB domain containing 48 Neighboring gene uncharacterized LOC113013908 Neighboring gene kelch-like protein 21 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039321.1 Chromosome 20 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kelch-like protein 21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039321.1 Reference fAstCal1.2 Primary Assembly

    Range
    6613067..6629900 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026154121.1 → XP_026009906.1  kelch-like protein 21

    UniProtKB/TrEMBL
    A0A3P8QC00
    Related
    ENSACLP00000026928.1, ENSACLT00000027559.1
    Conserved Domains (4) summary
    PHA03098
    Location:35 → 549
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:328 → 370
    Kelch; KELCH repeat [structural motif]
    cd18250
    Location:17 → 140
    BTB_POZ_KLHL21; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 21 (KLHL21)
    cd18460
    Location:135 → 235
    BACK_KLHL21; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 21 (KLHL21)

  2. XM_026154123.1 → XP_026009908.1  kelch-like protein 21

    UniProtKB/TrEMBL
    A0A3P8QC00
    Related
    ENSACLP00000026888.1, ENSACLT00000027519.1
    Conserved Domains (4) summary
    PHA03098
    Location:35 → 549
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:328 → 370
    Kelch; KELCH repeat [structural motif]
    cd18250
    Location:17 → 140
    BTB_POZ_KLHL21; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 21 (KLHL21)
    cd18460
    Location:135 → 235
    BACK_KLHL21; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 21 (KLHL21)

  3. XM_026154122.1 → XP_026009907.1  kelch-like protein 21

    UniProtKB/TrEMBL
    A0A3P8QC00
    Related
    ENSACLP00000026941.1, ENSACLT00000027572.1
    Conserved Domains (4) summary
    PHA03098
    Location:35 → 549
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:328 → 370
    Kelch; KELCH repeat [structural motif]
    cd18250
    Location:17 → 140
    BTB_POZ_KLHL21; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 21 (KLHL21)
    cd18460
    Location:135 → 235
    BACK_KLHL21; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 21 (KLHL21)
Nucleotide Protein
Heading Accession and Version

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