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chp1 calcineurin-like EF-hand protein 1 [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113012422, updated on 15-Mar-2024

Summary

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Gene symbol
chp1
Gene description
calcineurin-like EF-hand protein 1
See related
Ensembl:ENSACLG00000027337
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
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Genomic context

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See chp1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 19 NC_039320.1 (14954528..14961248)

Chromosome 19 - NC_039320.1Genomic Context describing neighboring genes Neighboring gene pecanex 1 Neighboring gene legumain Neighboring gene uncharacterized LOC113012134 Neighboring gene opa interacting protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039320.1 Chromosome 19 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcineurin B homologous protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039320.1 Reference fAstCal1.2 Primary Assembly

    Range
    14954528..14961248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026152631.1 → XP_026008416.1  calcineurin B homologous protein 1

    UniProtKB/TrEMBL
    A0A3P8RHM2, A0A3P8RI34
    Related
    ENSACLP00000040602.1, ENSACLT00000041558.1
    Conserved Domains (1) summary
    COG5126
    Location:23 → 181
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein
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