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efr3a EFR3 homolog A (S. cerevisiae) [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113010207, updated on 15-Mar-2024

Summary

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Gene symbol
efr3a
Gene description
EFR3 homolog A (S. cerevisiae)
See related
Ensembl:ENSACLG00000023819
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 18
Exon count:
28
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 18 NC_039319.1 (3302416..3413857, complement)

Chromosome 18 - NC_039319.1Genomic Context describing neighboring genes Neighboring gene HERV-H LTR-associating 1 Neighboring gene otoconin 90 Neighboring gene adenylate cyclase 8 (brain) Neighboring gene brain abundant, membrane attached signal protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039319.1 Chromosome 18 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein EFR3 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039319.1 Reference fAstCal1.2 Primary Assembly

    Range
    3302416..3413857 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026149173.1 → XP_026004958.1  protein EFR3 homolog A isoform X2

    UniProtKB/TrEMBL
    A0A3P8R178

  2. XM_026149172.1 → XP_026004957.1  protein EFR3 homolog A isoform X2

    UniProtKB/TrEMBL
    A0A3P8R178
    Related
    ENSACLP00000035239.1, ENSACLT00000036068.1

  3. XM_026149171.1 → XP_026004956.1  protein EFR3 homolog A isoform X2

    UniProtKB/TrEMBL
    A0A3P8R178

  4. XM_026149169.1 → XP_026004954.1  protein EFR3 homolog A isoform X1

    UniProtKB/TrEMBL
    A0A3P8R178

  5. XM_026149174.1 → XP_026004959.1  protein EFR3 homolog A isoform X3

    UniProtKB/TrEMBL
    A0A3P8R178
    Related
    ENSACLP00000035286.1, ENSACLT00000036116.1
Nucleotide Protein
Heading Accession and Version

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