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pou3f3 POU class 3 homeobox 3 [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113007862, updated on 21-Dec-2023

Summary

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Gene symbol
pou3f3
Gene description
POU class 3 homeobox 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
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Genomic context

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Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 16 NC_039317.1 (14941615..14948334, complement)

Chromosome 16 - NC_039317.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113008126 Neighboring gene uncharacterized LOC113008002 Neighboring gene transmembrane protein 182a Neighboring gene major facilitator superfamily domain containing 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039317.1 Chromosome 16 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
POU domain, class 3, transcription factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039317.1 Reference fAstCal1.2 Primary Assembly

    Range
    14941615..14948334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026144870.1 → XP_026000655.1  POU domain, class 3, transcription factor 3

    Conserved Domains (2) summary
    smart00352
    Location:235 → 309
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:330 → 383
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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