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atp11a ATPase phospholipid transporting 11A [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113007792, updated on 15-Mar-2024

Summary

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Gene symbol
atp11a
Gene description
ATPase phospholipid transporting 11A
See related
Ensembl:ENSACLG00000001016
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
30
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 16 NC_039317.1 (14202347..14234117, complement)

Chromosome 16 - NC_039317.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 11 Neighboring gene mcf.2 cell line derived transforming sequence-like b Neighboring gene SRY-box transcription factor 1a Neighboring gene Rho guanine nucleotide exchange factor (GEF) 7a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039317.1 Chromosome 16 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase IH

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039317.1 Reference fAstCal1.2 Primary Assembly

    Range
    14202347..14234117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026144730.1 → XP_026000515.1  probable phospholipid-transporting ATPase IH isoform X2

    UniProtKB/TrEMBL
    A0A3P8N9N5
    Related
    ENSACLP00000001440.1, ENSACLT00000001473.1
    Conserved Domains (1) summary
    cd02073
    Location:47 → 979
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

  2. XM_026144729.1 → XP_026000514.1  probable phospholipid-transporting ATPase IH isoform X1

    UniProtKB/TrEMBL
    A0A3P8NA37
    Related
    ENSACLP00000001618.1, ENSACLT00000001653.1
Nucleotide Protein
Heading Accession and Version

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