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SCGN secretagogin, EF-hand calcium binding protein [ Dromaius novaehollandiae (emu) ]

Gene ID: 112992507, updated on 19-Apr-2024

Summary

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Gene symbol
SCGN
Gene description
secretagogin, EF-hand calcium binding protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 2 NC_088099.1 (94449159..94478575, complement)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020453604.1 (1643222..1672592)

Chromosome 2 - NC_088099.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112992537 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 4 Neighboring gene par-6 family cell polarity regulator gamma Neighboring gene uncharacterized LOC135327531 Neighboring gene capping protein regulator and myosin 1 linker 1 Neighboring gene uncharacterized LOC135327329

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of presynaptic cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in terminal bouton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secretagogin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088099.1 Reference bDroNov1.hap1

    Range
    94449159..94478575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064505475.1 → XP_064361545.1  secretagogin

Nucleotide Protein
Heading Accession and Version

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