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NAV2 neuron navigator 2 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112977251, updated on 15-Mar-2024

Summary

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Gene symbol
NAV2
Gene description
neuron navigator 2
See related
Ensembl:ENSARWG00000006877
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See NAV2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
41
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020451105.1 (2484762..2727150)

NW_020451105.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 13 Neighboring gene cysteine and glycine rich protein 3 Neighboring gene E2F transcription factor 8 Neighboring gene developing brain homeobox 1 Neighboring gene protein arginine methyltransferase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020451105 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuron navigator 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020451105.1 Reference aptRow1

    Range
    2484762..2727150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026089351.1 → XP_025945136.1  neuron navigator 2 isoform X1

    Conserved Domains (4) summary
    cd00014
    Location:86 → 187
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    pfam13401
    Location:2112 → 2204
    AAA_22; AAA domain
    pfam15898
    Location:1872 → 1925
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    cl25732
    Location:1652 → 1925
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_026089354.1 → XP_025945139.1  neuron navigator 2 isoform X3

    Conserved Domains (4) summary
    cd00014
    Location:86 → 187
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    pfam13401
    Location:2089 → 2181
    AAA_22; AAA domain
    pfam15898
    Location:1849 → 1902
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    cl25732
    Location:1629 → 1902
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_026089352.1 → XP_025945137.1  neuron navigator 2 isoform X2

    Related
    ENSARWP00000009878.1, ENSARWT00000011243.1
    Conserved Domains (3) summary
    cd00014
    Location:86 → 187
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    pfam13401
    Location:2086 → 2178
    AAA_22; AAA domain
    pfam15898
    Location:1846 → 1899
    PRKG1_interact; cGMP-dependent protein kinase interacting domain

  4. XM_026089355.1 → XP_025945140.1  neuron navigator 2 isoform X4

    Conserved Domains (3) summary
    TIGR04211
    Location:719 → 795
    SH3_and_anchor; SH3 domain protein
    pfam13401
    Location:1176 → 1268
    AAA_22; AAA domain
    pfam15898
    Location:936 → 989
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
Nucleotide Protein
Heading Accession and Version

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