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PPP1R16B protein phosphatase 1 regulatory subunit 16B [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112971426, updated on 15-Mar-2024

Summary

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Gene symbol
PPP1R16B
Gene description
protein phosphatase 1 regulatory subunit 16B
See related
Ensembl:ENSARWG00000014824
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See PPP1R16B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020450694.1 (1848778..1918777, complement)

NW_020450694.1Genomic Context describing neighboring genes Neighboring gene protein FAM83D-B-like Neighboring gene protein FAM83D-like Neighboring gene actin related protein 5 Neighboring gene Rho GTPase activating protein 40

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020450694 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment of endothelial barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1 regulatory inhibitor subunit 16B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020450694.1 Reference aptRow1

    Range
    1848778..1918777 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026076847.1 → XP_025932632.1  protein phosphatase 1 regulatory inhibitor subunit 16B

    Related
    ENSARWP00000021705.1, ENSARWT00000024611.1
    Conserved Domains (2) summary
    cd00204
    Location:70 → 183
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:70 → 97
    ANK; ANK repeat [structural motif]

  2. XM_026076846.1 → XP_025932631.1  protein phosphatase 1 regulatory inhibitor subunit 16B

    Conserved Domains (2) summary
    cd00204
    Location:70 → 183
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:70 → 97
    ANK; ANK repeat [structural motif]

  3. XM_026076845.1 → XP_025932630.1  protein phosphatase 1 regulatory inhibitor subunit 16B

    Related
    ENSARWP00000021704.1, ENSARWT00000024610.1
    Conserved Domains (2) summary
    cd00204
    Location:70 → 183
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:70 → 97
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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