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BATF3 basic leucine zipper ATF-like transcription factor 3 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112969250, updated on 15-Mar-2024

Summary

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Gene symbol
BATF3
Gene description
basic leucine zipper ATF-like transcription factor 3
See related
Ensembl:ENSARWG00000003448
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020449863.1 (139630..144978)

NW_020449863.1Genomic Context describing neighboring genes Neighboring gene TatD DNase domain containing 3 Neighboring gene NSL1 component of MIS12 kinetochore complex Neighboring gene activating transcription factor 3 Neighboring gene uncharacterized LOC112969266

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020449863 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic leucine zipper transcriptional factor ATF-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020449863.1 Reference aptRow1

    Range
    139630..144978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026072361.1 → XP_025928146.1  basic leucine zipper transcriptional factor ATF-like 3

    Related
    ENSARWP00000004758.1, ENSARWT00000005470.1
    Conserved Domains (2) summary
    cd14686
    Location:22 → 73
    bZIP; coiled coil [structural motif]
    cl21462
    Location:19 → 76
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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