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PHC3 polyhomeotic homolog 3 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112964092, updated on 15-Mar-2024

Summary

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Gene symbol
PHC3
Gene description
polyhomeotic homolog 3
See related
Ensembl:ENSARWG00000017297
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447197.1 (4492298..4524884)

NW_020447197.1Genomic Context describing neighboring genes Neighboring gene protein kinase C iota Neighboring gene uncharacterized LOC112963867 Neighboring gene uncharacterized LOC112963875 Neighboring gene G protein-coupled receptor 160 Neighboring gene SEC62 homolog, preprotein translocation factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020447197 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyhomeotic-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020447197.1 Reference aptRow1

    Range
    4492298..4524884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026061759.1 → XP_025917544.1  polyhomeotic-like protein 3 isoform X1

    Conserved Domains (2) summary
    cd09577
    Location:916 → 984
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl28087
    Location:422 → 594
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

  2. XM_026061765.1 → XP_025917550.1  polyhomeotic-like protein 3 isoform X2

    Related
    ENSARWP00000025462.1, ENSARWT00000028829.1
    Conserved Domains (2) summary
    cd09577
    Location:905 → 973
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl25764
    Location:415 → 581
    PAT1; Topoisomerase II-associated protein PAT1

  3. XM_026061776.1 → XP_025917561.1  polyhomeotic-like protein 3 isoform X3

    Related
    ENSARWP00000025464.1, ENSARWT00000028831.1
    Conserved Domains (2) summary
    cd09577
    Location:863 → 931
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl25764
    Location:373 → 539
    PAT1; Topoisomerase II-associated protein PAT1

  4. XM_026061781.1 → XP_025917566.1  polyhomeotic-like protein 3 isoform X4

    Related
    ENSARWP00000025465.1, ENSARWT00000028832.1
    Conserved Domains (1) summary
    cl28087
    Location:422 → 594
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

  5. XM_026061789.1 → XP_025917574.1  polyhomeotic-like protein 3 isoform X5

    Conserved Domains (1) summary
    cl25764
    Location:426 → 592
    PAT1; Topoisomerase II-associated protein PAT1

RNA

  1. XR_003252855.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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