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APAF1 apoptotic peptidase activating factor 1 [ Nothoprocta perdicaria ]

Gene ID: 112959481, updated on 15-Mar-2024

Summary

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Gene symbol
APAF1
Gene description
apoptotic peptidase activating factor 1
See related
Ensembl:ENSNPEG00000007788
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454272.1 (1030096..1061494)

NW_020454272.1Genomic Context describing neighboring genes Neighboring gene inhibitor of nuclear factor kappa-B kinase-interacting protein-like Neighboring gene inhibitor of nuclear factor kappa-B kinase-interacting protein-like Neighboring gene solute carrier family 25 member 3 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 1B Neighboring gene bridge-like lipid transfer protein family member 3B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020454272 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of apoptosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apoptotic protease-activating factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020454272.1 Reference notPer1

    Range
    1030096..1061494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026053503.1 → XP_025909288.1  apoptotic protease-activating factor 1

    UniProtKB/TrEMBL
    A0A8C7ECT4
    Related
    ENSNPEP00000010456.1, ENSNPET00000010726.1
    Conserved Domains (4) summary
    cd00200
    Location:606 → 909
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cd08323
    Location:7 → 92
    CARD_APAF1; Caspase activation and recruitment domain similar to that found in Apoptotic Protease-Activating Factor 1
    sd00039
    Location:660 → 696
    7WD40; WD40 repeat [structural motif]
    pfam00931
    Location:129 → 415
    NB-ARC; NB-ARC domain

  2. XM_026053504.1 → XP_025909289.1  apoptotic protease-activating factor 1

    UniProtKB/TrEMBL
    A0A8C7ECT4
    Conserved Domains (4) summary
    cd00200
    Location:606 → 909
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cd08323
    Location:7 → 92
    CARD_APAF1; Caspase activation and recruitment domain similar to that found in Apoptotic Protease-Activating Factor 1
    sd00039
    Location:660 → 696
    7WD40; WD40 repeat [structural motif]
    pfam00931
    Location:129 → 415
    NB-ARC; NB-ARC domain
Nucleotide Protein
Heading Accession and Version

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