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PCGF5 polycomb group ring finger 5 [ Nothoprocta perdicaria ]

Gene ID: 112957489, updated on 15-Mar-2024

Summary

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Gene symbol
PCGF5
Gene description
polycomb group ring finger 5
See related
Ensembl:ENSNPEG00000013419
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See PCGF5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454217.1 (1013293..1036154)

NW_020454217.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112957956 Neighboring gene uncharacterized LOC112957743 Neighboring gene uncharacterized LOC112957904 Neighboring gene HECT domain E3 ubiquitin protein ligase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020454217 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb group RING finger protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020454217.1 Reference notPer1

    Range
    1013293..1036154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026051140.1 → XP_025906925.1  polycomb group RING finger protein 5

    UniProtKB/TrEMBL
    A0A8C7EGC5
    Related
    ENSNPEP00000018243.1, ENSNPET00000018709.1
    Conserved Domains (3) summary
    pfam16207
    Location:162 → 249
    RAWUL; RAWUL domain RING finger- and WD40-associated ubiquitin-like
    cd16735
    Location:14 → 60
    RING-HC_PCGF3; RING finger found in polycomb group RING finger protein 3 (PCGF3) and similar proteins
    cl26688
    Location:12 → 117
    DWNN; DWNN domain
Nucleotide Protein
Heading Accession and Version

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