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NABP1 nucleic acid binding protein 1 [ Nothoprocta perdicaria ]

Gene ID: 112956067, updated on 15-Mar-2024

Summary

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Gene symbol
NABP1
Gene description
nucleic acid binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454205.1 (763240..769097, complement)

NW_020454205.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein with EGF like and two follistatin like domains 2 Neighboring gene caveolae associated protein 2 Neighboring gene testis specific serine kinase 6 Neighboring gene myosin IB

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020454205 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to ionizing radiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SOSS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SOSS complex subunit B2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020454205.1 Reference notPer1

    Range
    763240..769097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026049573.1 → XP_025905358.1  SOSS complex subunit B2 isoform X1

    Conserved Domains (2) summary
    cd04491
    Location:22 → 99
    SoSSB_OBF; A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In vitro, SSoSSB ...
    cl26247
    Location:127 → 186
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  2. XM_026049580.1 → XP_025905365.1  SOSS complex subunit B2 isoform X2

    Conserved Domains (1) summary
    cd04491
    Location:22 → 99
    SoSSB_OBF; A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In vitro, SSoSSB ...

  3. XM_026049589.1 → XP_025905374.1  SOSS complex subunit B2 isoform X3

    Conserved Domains (1) summary
    cd04491
    Location:22 → 99
    SoSSB_OBF; A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In vitro, SSoSSB ...
Nucleotide Protein
Heading Accession and Version

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