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PPL periplakin [ Nothoprocta perdicaria ]

Gene ID: 112955723, updated on 15-Mar-2024

Summary

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Gene symbol
PPL
Gene description
periplakin
See related
Ensembl:ENSNPEG00000010999
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455854.1 (1613700..1638967, complement)

NW_020455854.1Genomic Context describing neighboring genes Neighboring gene NME/NM23 nucleoside diphosphate kinase 3 Neighboring gene ubinuclein 1 Neighboring gene syntaxin-binding protein 4-like Neighboring gene SEC14 like lipid binding 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020455854 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
periplakin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020455854.1 Reference notPer1

    Range
    1613700..1638967 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026049068.1 → XP_025904853.1  periplakin

    UniProtKB/TrEMBL
    A0A8C6ZF59
    Related
    ENSNPEP00000014722.1, ENSNPET00000015083.1
    Conserved Domains (2) summary
    cl02488
    Location:215 → 389
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl25732
    Location:774 → 1651
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
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