U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ALS2 alsin Rho guanine nucleotide exchange factor ALS2 [ Nothoprocta perdicaria ]

Gene ID: 112954419, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ALS2
Gene description
alsin Rho guanine nucleotide exchange factor ALS2
See related
Ensembl:ENSNPEG00000007538
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
35
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454205.1 (3248165..3283517)

NW_020454205.1Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 7 Neighboring gene cyclin dependent kinase 15 Neighboring gene MAGUK p55 scaffold protein 4 Neighboring gene transmembrane protein 237

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020454205 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alsin
Names
ALS2, alsin Rho guanine nucleotide exchange factor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020454205.1 Reference notPer1

    Range
    3248165..3283517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026047615.1 → XP_025903400.1  alsin

    UniProtKB/TrEMBL
    A0A8C6Z4P0
    Related
    ENSNPEP00000010054.1, ENSNPET00000010303.1
    Conserved Domains (7) summary
    cd13269
    Location:896 → 1001
    PH_alsin; Alsin Pleckstrin homology (PH) domain
    pfam00415
    Location:520 → 567
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam02204
    Location:1546 → 1645
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    pfam13540
    Location:554 → 583
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    cl02571
    Location:686 → 873
    RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
    cl27415
    Location:1041 → 1158
    COG4642; Uncharacterized conserved protein [Function unknown]
    cl27697
    Location:31 → 299
    RCC1; Regulator of chromosome condensation (RCC1) repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.