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MARCHF1 membrane associated ring-CH-type finger 1 [ Nothoprocta perdicaria ]

Gene ID: 112949241, updated on 15-Mar-2024

Summary

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Gene symbol
MARCHF1
Gene description
membrane associated ring-CH-type finger 1
See related
Ensembl:ENSNPEG00000000792
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Also known as
MARCH1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455521.1 (1121592..1183879)

NW_020455521.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112949238 Neighboring gene uncharacterized LOC112949293 Neighboring gene uncharacterized LOC112949261 Neighboring gene translation machinery associated 16 homolog Neighboring gene neuropeptide Y receptor Y5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020455521 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MHC protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of peptide antigen via MHC class II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MARCH1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020455521.1 Reference notPer1

    Range
    1121592..1183879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026041621.1 → XP_025897406.1  E3 ubiquitin-protein ligase MARCH1

    UniProtKB/TrEMBL
    A0A8C6YMD5
    Related
    ENSNPEP00000001007.1, ENSNPET00000001023.1
    Conserved Domains (1) summary
    cd16698
    Location:76 → 127
    RING_CH-C4HC3_MARCH1_like; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING finger protein MARCH1, MARCH8, and similar proteins
Nucleotide Protein
Heading Accession and Version

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