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ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 [ Nothoprocta perdicaria ]

Gene ID: 112949193, updated on 15-Mar-2024

Summary

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Gene symbol
ARAP1
Gene description
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
See related
Ensembl:ENSNPEG00000013001
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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See ARAP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455519.1 (722695..747110, complement)

NW_020455519.1Genomic Context describing neighboring genes Neighboring gene arrestin beta 1 Neighboring gene phosphodiesterase 2A Neighboring gene StAR related lipid transfer domain containing 10 Neighboring gene ClpB family mitochondrial disaggregase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020455519 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,4,5-trisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020455519.1 Reference notPer1

    Range
    722695..747110 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026041569.1 → XP_025897354.1  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8C6ZV50
    Related
    ENSNPEP00000017490.1, ENSNPET00000017920.1
    Conserved Domains (7) summary
    cd04385
    Location:698 → 876
    RhoGAP_ARAP; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in ARAPs. ARAPs (also known as centaurin deltas) contain, besides the RhoGAP domain, an Arf GAP, ankyrin repeat ras-associating, and PH domains. Since their ArfGAP activity ...
    cd13253
    Location:71 → 163
    PH1_ARAP; ArfGAP with RhoGAP domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain, repeat 1
    cd13254
    Location:183 → 268
    PH2_ARAP; ArfGAP with RhoGAP domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain, repeat 2
    cd13259
    Location:1003 → 1130
    PH5_ARAP; ArfGAP with RhoGAP domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain, repeat 5
    pfam01412
    Location:278 → 394
    ArfGap; Putative GTPase activating protein for Arf
    cl17171
    Location:486 → 592
    PH-like; Pleckstrin homology-like domain
    cl25424
    Location:912 → 998
    TGS; The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is structurally similar to ubiquitin. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information ...
Nucleotide Protein
Heading Accession and Version

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