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PDE4D phosphodiesterase 4D [ Nothoprocta perdicaria ]

Gene ID: 112945535, updated on 15-Mar-2024

Summary

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Gene symbol
PDE4D
Gene description
phosphodiesterase 4D
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454093.1 (8167431..8471144)

NW_020454093.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112945558 Neighboring gene DEP domain containing 1B Neighboring gene RAB3C, member RAS oncogene family Neighboring gene polo like kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020454093 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-AMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cAMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cAMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cardiac muscle cell contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-specific 3',5'-cyclic phosphodiesterase 4D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020454093.1 Reference notPer1

    Range
    8167431..8471144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026037174.1 → XP_025892959.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X1

    Conserved Domains (2) summary
    pfam17084
    Location:46 → 318
    TDA11; Topoisomerase I damage affected protein 11
    pfam00233
    Location:399 → 636
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  2. XM_026037182.1 → XP_025892967.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X2

    Conserved Domains (1) summary
    pfam00233
    Location:331 → 568
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_026037189.1 → XP_025892974.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X3

    UniProtKB/TrEMBL
    A0A8C6YNG0
    Conserved Domains (1) summary
    pfam00233
    Location:170 → 407
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
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