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ASPH aspartate beta-hydroxylase [ Vulpes vulpes (red fox) ]

Gene ID: 112932323, updated on 15-Mar-2024

Summary

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Gene symbol
ASPH
Gene description
aspartate beta-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356438.1 (11567309..11776452, complement)

NW_020356438.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112931783 Neighboring gene SRA stem-loop-interacting RNA-binding protein, mitochondrial pseudogene Neighboring gene clavesin 1 Neighboring gene splicing regulatory glutamine/lysine-rich protein 1-like Neighboring gene MICOS complex subunit MIC26 pseudogene Neighboring gene presenilin-2 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356438 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356438.1 Reference VulVul2.2 Primary Assembly

    Range
    11567309..11776452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026015259.1 → XP_025871044.1  aspartyl/asparaginyl beta-hydroxylase

    UniProtKB/TrEMBL
    A0A3Q7T2B5
    Conserved Domains (5) summary
    pfam05279
    Location:33 → 308
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    sd00006
    Location:456 → 480
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:589 → 742
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    cl26250
    Location:340 → 450
    TPR_6; Tetratricopeptide repeat
    cl27017
    Location:356 → 551
    YfgC; Putative Zn-dependent protease, contains TPR repeats [General function prediction only]
Nucleotide Protein Strain
Heading Accession and Version

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