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PDF peptide deformylase, mitochondrial [ Vulpes vulpes (red fox) ]

Gene ID: 112929468, updated on 15-Mar-2024

Summary

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Gene symbol
PDF
Gene description
peptide deformylase, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356521.1 (4985590..4987294, complement)

NW_020356521.1Genomic Context describing neighboring genes Neighboring gene syntrophin beta 2 Neighboring gene vacuolar protein sorting 4 homolog A Neighboring gene component of oligomeric golgi complex 8 Neighboring gene nucleolar pre-rRNA processing protein NIP7 Neighboring gene transmembrane p24 trafficking protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356521 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide deformylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-terminal protein amino acid modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in co-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-methionine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptide deformylase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356521.1 Reference VulVul2.2 Primary Assembly

    Range
    4985590..4987294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026011579.1 → XP_025867364.1  peptide deformylase, mitochondrial

    UniProtKB/TrEMBL
    A0A3Q7SUV7
    Conserved Domains (1) summary
    cd00487
    Location:1 → 122
    Pep_deformylase; Polypeptide or peptide deformylase; a family of metalloenzymes that catalyzes the removal of the N-terminal formyl group in a growing polypeptide chain following translation initiation during protein synthesis in prokaryotes. These enzymes utilize Fe(II) ...
Nucleotide Protein Strain
Heading Accession and Version

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