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ZBED9 zinc finger BED-type containing 9 [ Vulpes vulpes (red fox) ]

Gene ID: 112910270, updated on 15-Mar-2024

Summary

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Gene symbol
ZBED9
Gene description
zinc finger BED-type containing 9
See related
Ensembl:ENSVVUG00000020133
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356663.1 (400054..422266)

NW_020356663.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene transfer RNA isoleucine (anticodon UAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356663 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA integration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SCAN domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356663.1 Reference VulVul2.2 Primary Assembly

    Range
    400054..422266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025986495.1 → XP_025842280.1  SCAN domain-containing protein 3

    UniProtKB/TrEMBL
    A0A3Q7SK36
    Related
    ENSVVUP00000027411.1, ENSVVUT00000036477.1
    Conserved Domains (2) summary
    smart00431
    Location:48 → 160
    SCAN; leucine rich region
    pfam05699
    Location:1240 → 1297
    Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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