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CNN1 calponin 1 [ Vulpes vulpes (red fox) ]

Gene ID: 112908150, updated on 15-Mar-2024

Summary

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Gene symbol
CNN1
Gene description
calponin 1
See related
Ensembl:ENSVVUG00000023798
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356617.1 (882768..899826)

NW_020356617.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 653 Neighboring gene ECSIT signaling integrator Neighboring gene elongation factor 1 Neighboring gene acid phosphatase 5, tartrate resistant

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356617 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calponin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356617.1 Reference VulVul2.2 Primary Assembly

    Range
    882768..899826
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025983558.1 → XP_025839343.1  calponin-1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7R1H4
    Conserved Domains (2) summary
    pfam00402
    Location:164 → 188
    Calponin; Calponin family repeat
    cd21282
    Location:27 → 134
    CH_CNN1; calponin homology (CH) domain found in calponin-1 and similar proteins

  2. XM_025983556.1 → XP_025839341.1  calponin-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7R1Y8
    Conserved Domains (2) summary
    pfam00402
    Location:208 → 231
    Calponin; Calponin family repeat
    cl27700
    Location:33 → 192
    Calponin; Calponin family repeat

  3. XM_025983559.1 → XP_025839344.1  calponin-1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7R1H4
    Related
    ENSVVUP00000032901.1, ENSVVUT00000043458.1
    Conserved Domains (2) summary
    pfam00402
    Location:164 → 188
    Calponin; Calponin family repeat
    cd21282
    Location:27 → 134
    CH_CNN1; calponin homology (CH) domain found in calponin-1 and similar proteins

  4. XM_025983557.1 → XP_025839342.1  calponin-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7R1Y8
    Conserved Domains (2) summary
    pfam00402
    Location:208 → 231
    Calponin; Calponin family repeat
    cl27700
    Location:33 → 192
    Calponin; Calponin family repeat
Nucleotide Protein Strain
Heading Accession and Version

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