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GABPB2 GA binding protein transcription factor subunit beta 2 [ Vulpes vulpes (red fox) ]

Gene ID: 112907713, updated on 15-Mar-2024

Summary

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Gene symbol
GABPB2
Gene description
GA binding protein transcription factor subunit beta 2
See related
Ensembl:ENSVVUG00000011753
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356611.1 (2589749..2619697)

NW_020356611.1Genomic Context describing neighboring genes Neighboring gene CDC42 small effector 1 Neighboring gene MLLT11 transcription factor 7 cofactor Neighboring gene semaphorin 6C Neighboring gene TNF alpha induced protein 8 like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356611 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GA-binding protein subunit beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356611.1 Reference VulVul2.2 Primary Assembly

    Range
    2589749..2619697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025983042.1 → XP_025838827.1  GA-binding protein subunit beta-2

    UniProtKB/TrEMBL
    A0A3Q7R0D3
    Conserved Domains (2) summary
    cd00204
    Location:34 → 156
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:38 → 68
    ANK; ANK repeat [structural motif]

  2. XM_025983041.1 → XP_025838826.1  GA-binding protein subunit beta-2

    UniProtKB/TrEMBL
    A0A3Q7R0D3
    Related
    ENSVVUP00000015984.1, ENSVVUT00000021025.1
    Conserved Domains (2) summary
    cd00204
    Location:34 → 156
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:38 → 68
    ANK; ANK repeat [structural motif]

  3. XM_025983043.1 → XP_025838828.1  GA-binding protein subunit beta-2

    UniProtKB/TrEMBL
    A0A3Q7R0D3
    Conserved Domains (2) summary
    cd00204
    Location:34 → 156
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:38 → 68
    ANK; ANK repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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