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MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1 [ Puma concolor (puma) ]

Gene ID: 112861982, updated on 15-Mar-2024

Summary

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Gene symbol
MICAL1
Gene description
microtubule associated monooxygenase, calponin and LIM domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339445.1 (51674941..51684829)

NW_020339445.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 9 Neighboring gene zinc finger and BTB domain containing 24 Neighboring gene sphingomyelin phosphodiesterase 2 Neighboring gene peptidylprolyl isomerase like 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339445 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-actin-monooxygenase MICAL1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339445.1 Reference PumCon1.0 Primary Assembly

    Range
    51674941..51684829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025925154.1 → XP_025780939.1  F-actin-monooxygenase MICAL1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6HZ87
    Conserved Domains (4) summary
    cd09358
    Location:697 → 750
    LIM_Mical_like; The LIM domain of Mical (molecule interacting with CasL) like family
    pfam00307
    Location:511 → 613
    CH; Calponin homology (CH) domain
    pfam12130
    Location:934 → 1063
    DUF3585; Protein of unknown function (DUF3585)
    cl27552
    Location:85 → 122
    FAD_binding_3; FAD binding domain

  2. XM_025925155.1 → XP_025780940.1  F-actin-monooxygenase MICAL1 isoform X2

    UniProtKB/TrEMBL
    A0A6P6HYQ3
    Conserved Domains (4) summary
    cd09358
    Location:611 → 664
    LIM_Mical_like; The LIM domain of Mical (molecule interacting with CasL) like family
    pfam00307
    Location:425 → 527
    CH; Calponin homology (CH) domain
    pfam12130
    Location:848 → 977
    DUF3585; Protein of unknown function (DUF3585)
    cl27552
    Location:85 → 122
    FAD_binding_3; FAD binding domain
Nucleotide Protein
Heading Accession and Version

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