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PKD2L2 polycystin 2 like 2, transient receptor potential cation channel [ Puma concolor (puma) ]

Gene ID: 112861260, updated on 15-Mar-2024

Summary

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Gene symbol
PKD2L2
Gene description
polycystin 2 like 2, transient receptor potential cation channel
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339444.1 (126890364..126939847, complement)

NW_020339444.1Genomic Context describing neighboring genes Neighboring gene Wnt family member 8A Neighboring gene U6 spliceosomal RNA Neighboring gene family with sequence similarity 13 member B Neighboring gene myotilin Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339444 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystic kidney disease 2-like 2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339444.1 Reference PumCon1.0 Primary Assembly

    Range
    126890364..126939847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025924565.1 → XP_025780350.1  polycystic kidney disease 2-like 2 protein isoform X2

    UniProtKB/TrEMBL
    A0A6P6HWX2
    Conserved Domains (1) summary
    cl27887
    Location:76 → 497
    PKD_channel; Polycystin cation channel

  2. XM_025924564.1 → XP_025780349.1  polycystic kidney disease 2-like 2 protein isoform X1

    UniProtKB/TrEMBL
    A0A6P6HXE1
    Conserved Domains (1) summary
    cl27887
    Location:76 → 497
    PKD_channel; Polycystin cation channel
Nucleotide Protein
Heading Accession and Version

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