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RUFY3 RUN and FYVE domain containing 3 [ Puma concolor (puma) ]

Gene ID: 112858036, updated on 15-Mar-2024

Summary

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Gene symbol
RUFY3
Gene description
RUN and FYVE domain containing 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See RUFY3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339223.1 (58218088..58298695)

NW_020339223.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S6 pseudogene Neighboring gene UTP3 small subunit processome component Neighboring gene G-rich RNA sequence binding factor 1 Neighboring gene MOB kinase activator 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339223 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein RUFY3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339223.1 Reference PumCon1.0 Primary Assembly

    Range
    58218088..58298695
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025921368.1 → XP_025777153.1  protein RUFY3 isoform X2

    UniProtKB/TrEMBL
    A0A6P6HPE7
    Conserved Domains (3) summary
    pfam15240
    Location:23 → 117
    Pro-rich; Proline-rich
    pfam02759
    Location:160 → 281
    RUN; RUN domain
    cl25732
    Location:300 → 501
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_025921367.1 → XP_025777152.1  protein RUFY3 isoform X1

    UniProtKB/TrEMBL
    A0A6P6HN33
    Conserved Domains (3) summary
    cd15744
    Location:561 → 608
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:103 → 224
    RUN; RUN domain
    cl25732
    Location:243 → 500
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_025921369.1 → XP_025777154.1  protein RUFY3 isoform X3

    UniProtKB/TrEMBL
    A0A6P6HMZ0
    Conserved Domains (2) summary
    COG1196
    Location:276 → 482
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:121 → 242
    RUN; RUN domain

  4. XM_025921370.1 → XP_025777155.1  protein RUFY3 isoform X4

    UniProtKB/TrEMBL
    A0A6P6HMU8
    Conserved Domains (2) summary
    COG1196
    Location:258 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:103 → 224
    RUN; RUN domain
Nucleotide Protein
Heading Accession and Version

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