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TBX2 T-box transcription factor 2 [ Puma concolor (puma) ]

Gene ID: 112853347, updated on 15-Mar-2024

Summary

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Gene symbol
TBX2
Gene description
T-box transcription factor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020337979.1 (13143251..13151354)

NW_020337979.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1D Neighboring gene BCAS3 microtubule associated cell migration factor Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene T-box transcription factor 4 Neighboring gene 60S ribosomal protein L26-like Neighboring gene BRCA1 interacting helicase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020337979 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: T-box transcription factor TBX2
Names
T-box 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020337979.1 Reference PumCon1.0 Primary Assembly

    Range
    13143251..13151354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025916916.1 → XP_025772701.1  LOW QUALITY PROTEIN: T-box transcription factor TBX2

    UniProtKB/TrEMBL
    A0A6P6HBN9
    Conserved Domains (2) summary
    pfam00907
    Location:106 → 286
    T-box
    pfam12598
    Location:304 → 382
    TBX; T-box transcription factor
Nucleotide Protein
Heading Accession and Version

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