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DPF1 double PHD fingers 1 [ Puma concolor (puma) ]

Gene ID: 112850982, updated on 15-Mar-2024

Summary

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Gene symbol
DPF1
Gene description
double PHD fingers 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338385.1 (8262202..8275248, complement)

NW_020338385.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 87 Neighboring gene signal induced proliferation associated 1 like 3 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 14A Neighboring gene serine peptidase inhibitor, Kunitz type 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020338385 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nBAF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein neuro-d4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338385.1 Reference PumCon1.0 Primary Assembly

    Range
    8262202..8275248 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025914488.1 → XP_025770273.1  zinc finger protein neuro-d4 isoform X3

    UniProtKB/TrEMBL
    A0A6P6H406
    Conserved Domains (4) summary
    COG5189
    Location:186 → 220
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    cd15530
    Location:328 → 373
    PHD2_d4; PHD finger 2 found in d4 gene family proteins
    cd15690
    Location:270 → 327
    PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
    pfam14051
    Location:13 → 79
    Requiem_N; N-terminal domain of DPF2/REQ

  2. XM_025914489.1 → XP_025770274.1  zinc finger protein neuro-d4 isoform X4

    UniProtKB/TrEMBL
    A0A6P6H3N4
    Conserved Domains (3) summary
    cd15530
    Location:310 → 365
    PHD2_d4; PHD finger 2 found in d4 gene family proteins
    cd15690
    Location:252 → 309
    PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
    pfam14051
    Location:39 → 110
    Requiem_N; N-terminal domain of DPF2/REQ

  3. XM_025914487.1 → XP_025770272.1  zinc finger protein neuro-d4 isoform X2

    UniProtKB/TrEMBL
    A0A6P6H3G6
    Conserved Domains (4) summary
    COG5189
    Location:212 → 246
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    cd15530
    Location:354 → 399
    PHD2_d4; PHD finger 2 found in d4 gene family proteins
    cd15690
    Location:296 → 353
    PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
    pfam14051
    Location:39 → 105
    Requiem_N; N-terminal domain of DPF2/REQ

  4. XM_025914486.1 → XP_025770271.1  zinc finger protein neuro-d4 isoform X1

    UniProtKB/TrEMBL
    A0A6P6H4H0
    Conserved Domains (4) summary
    COG5189
    Location:212 → 246
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    cd15530
    Location:354 → 409
    PHD2_d4; PHD finger 2 found in d4 gene family proteins
    cd15690
    Location:296 → 353
    PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
    pfam14051
    Location:39 → 105
    Requiem_N; N-terminal domain of DPF2/REQ
Nucleotide Protein
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